説明
This data product contains the quality-controlled, native sampling resolution data from NEON’s Tick and Tick-Borne Pathogen sampling crosswalked to Darwin Core. NEON tick sampling targets hard ticks in the family Ixodidae. The dataset includes collection, identification and pathogen testing data from 2014 – 2020. Data are collected across the United States including Alaska and Puerto Rico, but excluding Hawaii. Tick abundance and diversity are sampled at regular intervals using drag or flag sampling techniques. Collected ticks are identified to species and lifestage and/or sex by a professional taxonomist. A subset of identified nymphal ticks are tested for the presence of bacterial and protozoan pathogens. For additional details, see https://data.neonscience.org/data-products/DP1.10093.001 and https://data.neonscience.org/data-products/DP1.10092.001.
データ レコード
この sampling event リソース内のデータは、1 つまたは複数のデータ テーブルとして生物多様性データを共有するための標準化された形式であるダーウィン コア アーカイブ (DwC-A) として公開されています。 コア データ テーブルには、2,757 レコードが含まれています。
拡張データ テーブルは1 件存在しています。拡張レコードは、コアのレコードについての追加情報を提供するものです。 各拡張データ テーブル内のレコード数を以下に示します。
この IPT はデータをアーカイブし、データ リポジトリとして機能します。データとリソースのメタデータは、 ダウンロード セクションからダウンロードできます。 バージョン テーブルから公開可能な他のバージョンを閲覧でき、リソースに加えられた変更を知ることができます。
バージョン
次の表は、公にアクセス可能な公開バージョンのリソースのみ表示しています。
引用方法
研究者はこの研究内容を以下のように引用する必要があります。:
Paull S (2022): NEON ticks sampled using drag cloths and tick pathogen status. v1.2. National Ecological Observatory Network. Dataset/Samplingevent. https://bison.usgs.gov/ipt/resource?r=neon-tick-abundance-diversity-pathogen-data&v=1.2
権利
研究者は権利に関する下記ステートメントを尊重する必要があります。:
パブリッシャーとライセンス保持者権利者は National Ecological Observatory Network。 To the extent possible under law, the publisher has waived all rights to these data and has dedicated them to the Public Domain (CC0 1.0). Users may copy, modify, distribute and use the work, including for commercial purposes, without restriction.
GBIF登録
このリソースをはGBIF と登録されており GBIF UUID: 12315bb8-8ab3-446a-b5a4-2be93aade242が割り当てられています。 GBIF-US によって承認されたデータ パブリッシャーとして GBIF に登録されているNational Ecological Observatory Network が、このリソースをパブリッシュしました。
キーワード
Samplingevent
連絡先
- メタデータ提供者 ●
- 最初のデータ採集者 ●
- 連絡先
- 連絡先
地理的範囲
Data are collected at 46 terrestrial NEON sites across the United States including Alaska and Puerto Rico, but excluding Hawaii.
座標(緯度経度) | 南 西 [15.623, -168.75], 北 東 [71.301, -65.391] |
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生物分類学的範囲
This dataset covers hard ticks collected using the drag/flag method including: Ixodes pacificus, Amblyomma americanum, Amblyomma maculatum, Dermacentor andersoni, Dermacentor occidentalis, Dermacentor variabilis, Haemaphysalis leporispalustris, Haemaphysalis longicornis, Ixodes affinis, Ixodes angustus, Ixodes dentatus, Ixodes marxi, Ixodes muris, and Ixodes scapularis. This dataset also covers testing results for several tick-borne pathogens including: Anaplasma phagocytophilum, Babesia microti, Borrelia burgdorferi sensu lato, Borrelia lonestari, Borrelia mayonii, Borrelia myamotoi, Ehrlichia chaffeensis, Ehrlichia ewingii, Ehrlichia muris-like, Francisella tularensis, and Rickettsia rickettsii.
Family | Ixodidae (hard ticks) |
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Genus | Ixodes sp., Dermacentor sp., Haemaphysalis sp., Amblyomma sp., Borrelia sp., Ehrlichia sp. |
Species | Anaplasma phagocytophilum, Babesia microti, Francisella tularensis, Rickettsia rickettsii |
時間的範囲
開始日 / 終了日 | 2014-04-17 / 2020-10-06 |
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プロジェクトデータ
The National Science Foundation's National Ecological Observatory Network (NEON) is a continental-scale ecological observation facility, fully funded by NSF and operated by Battelle. NEON collects and provides open data from 81 field sites across the United States that characterize and quantify how our nation's ecosystems are changing. Each year, NEON collects and archives over 100,000 specimens and samples that complement the field observations and automated measurements collected at field sites. These samples represent a rich resource unique among natural history collections due to NEON’s utility for continental- and decadal-scale ecology. NEON’s archival samples are available upon request to support research studies and analyses. The comprehensive data, spatial extent and remote sensing technology provided by the NEON project will contribute to a better understanding and more accurate forecasting of how human activities impact ecology and how our society can more effectively address critical ecological questions and issues.
タイトル | National Ecological Observatory Network |
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ファンデイング | National Science Foundation |
Study Area Description | United States including Alaska, Hawaii and Puerto Rico |
プロジェクトに携わる要員:
収集方法
Ticks are collected along the border of a 40m x 40m plot using drag and/or flag sampling techniques. There are 6 plots sampled at each NEON site. Samples are sent to an external laboratory where they are enumerated and identified by a professional taxonomist. A bout of sampling is only performed if the high temperature in the 2 days prior to sampling is >0C. Sampling is only performed when the ground is dry and during periods of low wind (below 10-20 mph). The hottest part of the day is also avoided during the summer months.
Study Extent | This study includes data from 46 terrestrial field sites located across the United States including Alaska and Puerto Rico. Sampling occurs during the growing season every 3 weeks at sites with established tick populations (defined as capturing > 5 ticks in the previous field season), and every 6 weeks at sites without established tick populations. A subset of nymphal ticks are sent for pathogen testing once per year. |
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Quality Control | Many quality control measures are implemented at the point of data entry within a mobile data entry application or web user interface (UI). For example, data formats are constrained and data values controlled through the provision of dropdown options, which reduces the number of processing steps necessary to prepare the raw data for publication. An additional set of constraints are implemented during the process of ingest into the NEON database. Data collected prior to 2017 were processed using a paper‐based workflow that did not implement the full suite of quality control features associated with the interactive digital workflow. |
Method step description:
- Data from the 2022 data release were downloaded from the National Ecological Observatory Network data portal. Data included information on tick collection, identification and pathogen testing. The identification data were expanded to allow each row to represent a single tick to allow for documentation of associatedOccurrences.
コレクションデータ
コレクション名 | U.S. National Tick Collection |
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コレクション識別子 | https://cosm.georgiasouthern.edu/icps/u-s-national-tick-collection-usntc/ |
コレクション名 | NEON Biorepository - Tick Collection (DNA Extracts [Pathogen Extracts]) |
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コレクション識別子 | https://biorepo.neonscience.org/portal/collections/misc/collprofiles.php?collid=75 |
追加のメタデータ
代替識別子 | 12315bb8-8ab3-446a-b5a4-2be93aade242 |
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https://doi.org/10.15468/b52b9z | |
https://bison.usgs.gov/ipt/resource?r=neon-tick-abundance-diversity-pathogen-data |