Descripción
This data product contains the quality-controlled, native sampling resolution data from NEON’s Tick and Tick-Borne Pathogen sampling crosswalked to Darwin Core. NEON tick sampling targets hard ticks in the family Ixodidae. The dataset includes collection, identification and pathogen testing data from 2014 – 2020. Data are collected across the United States including Alaska and Puerto Rico, but excluding Hawaii. Tick abundance and diversity are sampled at regular intervals using drag or flag sampling techniques. Collected ticks are identified to species and lifestage and/or sex by a professional taxonomist. A subset of identified nymphal ticks are tested for the presence of bacterial and protozoan pathogens. For additional details, see https://data.neonscience.org/data-products/DP1.10093.001 and https://data.neonscience.org/data-products/DP1.10092.001.
Registros
Los datos en este recurso de evento de muestreo han sido publicados como Archivo Darwin Core(DwC-A), el cual es un formato estándar para compartir datos de biodiversidad como un conjunto de una o más tablas de datos. La tabla de datos del core contiene 2.757 registros.
también existen 1 tablas de datos de extensiones. Un registro en una extensión provee información adicional sobre un registro en el core. El número de registros en cada tabla de datos de la extensión se ilustra a continuación.
Este IPT archiva los datos y, por lo tanto, sirve como repositorio de datos. Los datos y los metadatos del recurso están disponibles para su descarga en la sección descargas. La tabla versiones enumera otras versiones del recurso que se han puesto a disposición del público y permite seguir los cambios realizados en el recurso a lo largo del tiempo.
Versiones
La siguiente tabla muestra sólo las versiones publicadas del recurso que son de acceso público.
¿Cómo referenciar?
Los usuarios deben citar este trabajo de la siguiente manera:
Paull S (2022): NEON ticks sampled using drag cloths and tick pathogen status. v1.2. National Ecological Observatory Network. Dataset/Samplingevent. https://bison.usgs.gov/ipt/resource?r=neon-tick-abundance-diversity-pathogen-data&v=1.2
Derechos
Los usuarios deben respetar los siguientes derechos de uso:
El publicador y propietario de los derechos de este trabajo es National Ecological Observatory Network. En la medida de lo posible según la ley, el publicador ha renunciado a todos los derechos sobre estos datos y los ha dedicado al Dominio público (CC0 1.0). Los usuarios pueden copiar, modificar, distribuir y utilizar la obra, incluso con fines comerciales, sin restricciones.
Registro GBIF
Este recurso ha sido registrado en GBIF con el siguiente UUID: 12315bb8-8ab3-446a-b5a4-2be93aade242. National Ecological Observatory Network publica este recurso y está registrado en GBIF como un publicador de datos avalado por GBIF-US.
Palabras clave
Samplingevent
Contactos
- Proveedor De Los Metadatos ●
- Originador ●
- Punto De Contacto
http://orcid.org/0000-0001-5589-9568
- Punto De Contacto
Cobertura geográfica
Data are collected at 46 terrestrial NEON sites across the United States including Alaska and Puerto Rico, but excluding Hawaii.
| Coordenadas límite | Latitud Mínima Longitud Mínima [15,623, -168,75], Latitud Máxima Longitud Máxima [71,301, -65,391] |
|---|
Cobertura taxonómica
This dataset covers hard ticks collected using the drag/flag method including: Ixodes pacificus, Amblyomma americanum, Amblyomma maculatum, Dermacentor andersoni, Dermacentor occidentalis, Dermacentor variabilis, Haemaphysalis leporispalustris, Haemaphysalis longicornis, Ixodes affinis, Ixodes angustus, Ixodes dentatus, Ixodes marxi, Ixodes muris, and Ixodes scapularis. This dataset also covers testing results for several tick-borne pathogens including: Anaplasma phagocytophilum, Babesia microti, Borrelia burgdorferi sensu lato, Borrelia lonestari, Borrelia mayonii, Borrelia myamotoi, Ehrlichia chaffeensis, Ehrlichia ewingii, Ehrlichia muris-like, Francisella tularensis, and Rickettsia rickettsii.
| Familia | Ixodidae (hard ticks) |
|---|---|
| Género | Ixodes sp., Dermacentor sp., Haemaphysalis sp., Amblyomma sp., Borrelia sp., Ehrlichia sp. |
| Especie | Anaplasma phagocytophilum, Babesia microti, Francisella tularensis, Rickettsia rickettsii |
Cobertura temporal
| Fecha Inicial / Fecha Final | 2014-04-17 / 2020-10-06 |
|---|
Datos del proyecto
The National Science Foundation's National Ecological Observatory Network (NEON) is a continental-scale ecological observation facility, fully funded by NSF and operated by Battelle. NEON collects and provides open data from 81 field sites across the United States that characterize and quantify how our nation's ecosystems are changing. Each year, NEON collects and archives over 100,000 specimens and samples that complement the field observations and automated measurements collected at field sites. These samples represent a rich resource unique among natural history collections due to NEON’s utility for continental- and decadal-scale ecology. NEON’s archival samples are available upon request to support research studies and analyses. The comprehensive data, spatial extent and remote sensing technology provided by the NEON project will contribute to a better understanding and more accurate forecasting of how human activities impact ecology and how our society can more effectively address critical ecological questions and issues.
| Título | National Ecological Observatory Network |
|---|---|
| Fuentes de Financiación | National Science Foundation |
| Descripción del área de estudio | United States including Alaska, Hawaii and Puerto Rico |
Personas asociadas al proyecto:
Métodos de muestreo
Ticks are collected along the border of a 40m x 40m plot using drag and/or flag sampling techniques. There are 6 plots sampled at each NEON site. Samples are sent to an external laboratory where they are enumerated and identified by a professional taxonomist. A bout of sampling is only performed if the high temperature in the 2 days prior to sampling is >0C. Sampling is only performed when the ground is dry and during periods of low wind (below 10-20 mph). The hottest part of the day is also avoided during the summer months.
| Área de Estudio | This study includes data from 46 terrestrial field sites located across the United States including Alaska and Puerto Rico. Sampling occurs during the growing season every 3 weeks at sites with established tick populations (defined as capturing > 5 ticks in the previous field season), and every 6 weeks at sites without established tick populations. A subset of nymphal ticks are sent for pathogen testing once per year. |
|---|---|
| Control de Calidad | Many quality control measures are implemented at the point of data entry within a mobile data entry application or web user interface (UI). For example, data formats are constrained and data values controlled through the provision of dropdown options, which reduces the number of processing steps necessary to prepare the raw data for publication. An additional set of constraints are implemented during the process of ingest into the NEON database. Data collected prior to 2017 were processed using a paper‐based workflow that did not implement the full suite of quality control features associated with the interactive digital workflow. |
Descripción de la metodología paso a paso:
- Data from the 2022 data release were downloaded from the National Ecological Observatory Network data portal. Data included information on tick collection, identification and pathogen testing. The identification data were expanded to allow each row to represent a single tick to allow for documentation of associatedOccurrences.
Datos de la colección
| Nombre de la Colección | U.S. National Tick Collection |
|---|---|
| Identificador de la Colección | https://cosm.georgiasouthern.edu/icps/u-s-national-tick-collection-usntc/ |
| Nombre de la Colección | NEON Biorepository - Tick Collection (DNA Extracts [Pathogen Extracts]) |
|---|---|
| Identificador de la Colección | https://biorepo.neonscience.org/portal/collections/misc/collprofiles.php?collid=75 |
Metadatos adicionales
| Identificadores alternativos | 12315bb8-8ab3-446a-b5a4-2be93aade242 |
|---|---|
| https://doi.org/10.15468/b52b9z | |
| https://bison.usgs.gov/ipt/resource?r=neon-tick-abundance-diversity-pathogen-data |