NC State University - USAblight - Phytophthora infestans

元數據
最新版本 published by United States Geological Survey on 3月 20, 2019 United States Geological Survey
首頁:
http://usablight.org/
發布日期:
2019年3月20日
授權條款:
CC0 1.0

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說明

USAblight tracks occurrences of blight (Phytophthora infestans) in the United States of America on potato and tomato crops.

版本

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權利

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此資料的發布者及權利單位為 United States Geological Survey。 To the extent possible under law, the publisher has waived all rights to these data and has dedicated them to the Public Domain (CC0 1.0). Users may copy, modify, distribute and use the work, including for commercial purposes, without restriction.

GBIF 註冊

此資源尚未向GBIF註冊

關鍵字

Metadata; oomycete; water mold; phytopathogenic fungi

聯絡資訊

Annie Simpson
  • 元數據提供者 ●
  • 出處
Biologist
United States Geological Survey
12201 Sunrise Valley Drive, Mail Stop 302
Reston
North Carolina
US
+1 (703) 648.4281
Dr. Jean Beagle Ristaino
  • 連絡人
Principle Investigator, USAblight.org
North Carolina State University
North Carolina
US
https://plantpath.cals.ncsu.edu/people/faculty/jean-ristaino/
Amanda Seville
  • 連絡人
Technical Specialist, USAblight.org
North Carolina State University
North Carolina
US
Elizabeth Sellers
  • 使用者

地理涵蓋範圍

Blight (Phytophthora infestans) occurrences in the United States of America.

界定座標範圍 緯度南界 經度西界 [23.886, -168.75], 緯度北界 經度東界 [71.636, -73.828]

分類群涵蓋範圍

Phytophthora infestans is a fungus-like microorganism, specifically an oomycete, which causes the serious potato and tomato disease known as late blight or potato blight.

Species Phythopthora infestans (late blight, potato blight, tomato blight)

引用文獻

  1. Knaus, B. J.; Tabima, J. F.; Davis, C. E.; Judelson, H. S.; Grünwald, N. J. 2016. Genomic analyses of dominant US clonal lineages of Phytophthora infestans reveals a shared common ancestry for clonal lineages US11 and US18 and a lack of recently shared ancestry among all other US lineages. Phytopathology 106: 1393-1403. 10.1094/PHYTO-10-15-0279-R 10.1094/PHYTO-10-15-0279-R
  2. Hansen, Z.; Everts, K. L.; Fry, W. E.; Gevens, A. J.; Grünwald, N. J.; Gugino, B. K.; Johnson, D. A.; Johnson, S. B.; Judelson, H. S.; Knaus, B. J.; McGrath, M. T.; Myers, K. L.; Ristaino, J. B.; Roberts, P. D.; Secor, G. A.; Smart, C. D. 2016. Genetic variation within clonal lineages of Phytophthora infestans revealed through genotyping-by-sequencing, and implications for late blight epidemiology. PLOS One. DOI:10.1371/journal.pone.0165690 DOI:10.1371/journal.pone.0165690
  3. Fry, W.F. 2016. Phytophthora infestans: New tools (and old ones) lead to new understanding and precision management. Annual Review of Phytopathology 54: 529-547. https://doi.org/10.1146/annurev-phyto-080615-095951 https://doi.org/10.1146/annurev-phyto-080615-095951
  4. Hansen, Z.; Knaus, B.; Tabima, J.; Press, C.; Judelson, H.S.; Grunwald, N.; Smart, C. 2016. SNP-based differentiation of Phytophthora infestans clonal lineages using locked nucleic acid probes and high resolution melt analysis. Plant Disease 100: 1297-1306. https://doi.org/10.1094/PDIS-11-15-1247-RE https://doi.org/10.1094/PDIS-11-15-1247-RE
  5. Hansen, Z.; Knaus, B.; Tabima, J.; Press, C.; Judelson, H.; Grunwald, N.; Smart, C. 2016. Loop-Mediated Isothermal Amplification (LAMP) for Detection of the Tomato and Potato Late Blight Pathogen Phytophthora infestans. Journal of Applied Microbiology 120: 1010-1020. 10.1111/jam.13079 10.1111/jam.13079
  6. Frost, K.E.; Seidl Johnson, A.C.; Gevens, A.J. 2016. Survival of isolates of the US-22, US-23, and US-24 clonal lineages of Phytophthora infestans by asexual means in tomato seed at cold temperatures. Plant Disease 100: 180-187. https://doi.org/10.1094/PDIS-04-15-0462-RE https://doi.org/10.1094/PDIS-04-15-0462-RE
  7. Martin, M.D.; Vieira, F.G.; Ho, S.Y.W.; Wales, N.; Schubert, M.; Seguin-Orlando, A.; Ristaino, J.B.; Gilbert, M.T.P. 2015. Genomic characterization of a South Amerian Phytophthora hybrid mandates reassessment of the geographic origins of Phytophthora infestans. Molecular Biology and Evolution 33: 478-491. https://doi.org/10.1093/molbev/msv241 https://doi.org/10.1093/molbev/msv241
  8. Saville, A.; Graham, K.; Grünwald, N.J.; Myers, K.; Fry, W.E.; Ristaino, J.B. 2015. Fungicide sensitivity of US genotypes of Phytophthora infestans to six oomycete-targeted compounds. Plant Disease 99: 659-666. https://doi.org/10.1094/PDIS-05-14-0452-RE https://doi.org/10.1094/PDIS-05-14-0452-RE
  9. Childers, R.; Danies, G.; Myers, K.; Fei, Z.; Small, I.M.; Fry, W.E.. 2014. Acquired resistance to mefenoxam in sensitive isolates of Phytophthora infestans. Phytopathology 105: 342-349. http://dx.doi.org/10.1094/PHYTO-05-14-0148-R http://dx.doi.org/10.1094/PHYTO-05-14-0148-R
  10. Danies, G.; Myers, K.; Mideros, M F.; Restrepo, S.; Martin, F.; Cooke, DEL; Smart, C.D.; Ristaino, J. B.; Seaman, A.J.; Gugino, B. K.; Grunwald, N. J.; Fry, W. E. 2014. An ephemeral sexual population of Phytophthora infestans in the northeastern United States and Canada. PLOS One. DOI: 10.1371/journal.pone.0116354 DOI: 10.1371/journal.pone.0116354
  11. Lassiter, E.S.; Russ, C.; Nusbaum, C.; Zeng, Q.; Saville, A.; Olarte, R.A.; Carbone, I.; Hu, C.-H.; Seguin-Orlando, A.; Samaniego, J.A.; Thorne, J.L.; Ristaino, J.B. 2014. Mitochondrial genome sequences reveal evolutionary relationships of the Phytophthora 1c clade species. Current Genetics. 61(4):567-77. DOI: 10.1007/s00294-015-0480-3 DOI: 10.1007/s00294-015-0480-3
  12. Martin, M.D.; Ho, S.Y.W.; Wales, N.; Ristaino, J.B.; Gilbert, M.T.P. 2014. Persistence of the mitochondrial lineage responsible for the Irish potato famine in extant New World Phytophthora infestans. Molecular Biology and Evolution 31: 1414-1420. https://doi.org/10.1093/molbev/msu086 https://doi.org/10.1093/molbev/msu086
  13. Danies, G.; Small, I. M.; Myers, K.; Childers, R.; Fry, W. E. 2013. Phenotypic characterization of recent clonal lineages of Phytophthora infestans in the United States. Plant Disease 97: 873-881. http://dx.doi.org/10.1094/PDIS-07-12-0682-RE http://dx.doi.org/10.1094/PDIS-07-12-0682-RE
  14. Fry, W. E.; McGrath, M. T.; Seaman, A.; Zitter, T. A.; McLeod, A.; Danies, G.; Small, I. M.; Myers, K.; Everts, K.; Gevens, A. J.; Gugino, B. K.; Johnson, S. B.; Judelson, H.; Ristaino, J.; Roberts, P.; Secor, G.; Seebold, Jr., K.; Snover-Clift, K.; Wyenandt, A.; Grünwald, N. J.; Smart, C. D. 2013. The 2009 late blight epidemic in the eastern United States - Causes and results. Plant Disease 97 (3): 296-306. http://dx.doi.org/10.1094/PDIS-08-12-0791-FE http://dx.doi.org/10.1094/PDIS-08-12-0791-FE
  15. Lee, S.C; Ristaino, J. B.; Heitman, J. 2013. Parallels in intercellular communication in oomycete and fungal pathogens of plants and humans. Plos Pathogens 8(12): 1-4. https://doi.org/10.1371/journal.ppat.1003028 https://doi.org/10.1371/journal.ppat.1003028
  16. Martin, M.D.; Cappellini, E.; Samaniego, J.A.; Zepeda, M.L.; Campos, P.F.; Seguin-Orlando, A.; Wales, N.; Orlando, L.; Ho, S.Y.W.; Dietrich, F.S.; Mieczkowski, P.A.; Heitman, J.; Willerslev, E.; Krogh, A.; Ristaino, J.B.; Gilbert, M.T.P. 2013. Reconstructing genome evolution in historic samples of the Irish potato famine pathogen. Nature Communications. DOI: 10.1038/ncomms3172 DOI: 10.1038/ncomms3172
  17. Gevens, A. J.; Seidl, A. C. 2012. First report of late blight caused by Phytophthora infestans clonal lineage US-22 on tomato and potato (Solanum tuberosum) in Wisconsin. Plant Disease 97:423. https://doi.org/10.1094/PDIS-08-12-0807-PDN https://doi.org/10.1094/PDIS-08-12-0807-PDN
  18. Gevens, A. J; Seidl, A. C. 2012. First Report of Late Blight Caused by Phytophthora infestans Clonal Lineage US-24 on Potato (Solanum tuberosum) in Wisconsin. Plant Disease 97: 152. https://doi.org/10.1094/PDIS-09-12-0825-PDN https://doi.org/10.1094/PDIS-09-12-0825-PDN
  19. Gevens, A. J.; Seidl, A. C. 2012. First report of late blight caused by Phytophthora infestans clonal lineage US-23 on tomato (Solanum lycopersicum) and potato (Solanum tuberosum) in Wisconsin. Plant Disease 97: 839. https://doi.org/10.1094/PDIS-09-12-0821-PDN https://doi.org/10.1094/PDIS-09-12-0821-PDN
  20. Grünwald, N. J. 2012. Genome sequences of Phytophthora enable translational plant disease management. Canadian Journal of Plant Pathology 34: 13-19. https://doi.org/10.1080/07060661.2012.664568 https://doi.org/10.1080/07060661.2012.664568
  21. Hu, C. H.; Perez, F. G.; Donahoo, R.; McLeod, A.; Myers, K.; Ivors, K.; Secor, G.; Roberts, P. D.; Fry, W. E.; Deahl, K. L.; and Ristaino. J. B. 2012. Recent genotypes of Phytophthora infestans in eastern USA reveal clonal populations and reappearance of mefenoxam sensitivity. Plant Disease 96: 1323-1330. http://dx.doi.org/10.1094/PDIS-03-11-0156-RE http://dx.doi.org/10.1094/PDIS-03-11-0156-RE
  22. Ristaino, J. B. 2012. Worldwide migrations, host shifts and reemergence of Phytophthora infestans, the Plant Destroyer. Ch. 10 in: Evolution of Virulence in Eukaryotic Microbes (Eds. L. D. Sibley, B. Howlett, and J. Heitman, Wiley and Sons). http://www.usablight.org/sites/default/files/upload/file/Ristaino%20-%20Worldwide%20migrations%20host%20shifts%20and%20reemergence%20of%20Phytophthora%20infestans%20the%20plant%20destroyer.pdf DOI: 10.1002/9781118308165
  23. Sanchez Perez, A. Seidl, A. C., Gevens, A. J. 2012. Oospore potential of newly introduced genotypes of Phytophthora infestans. In: Abstracts of the Papers Presented at the 95th Annual Meeting of the Potato Association of America, Wilmington, North Carolina, USA August 14–18, 2011. American Journal of Potato Research 89: 30-52. https://doi.org/10.1007/s12230-011-9230-3 https://doi.org/10.1007/s12230-011-9230-3

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