NC State University - USAblight - Phytophthora infestans

Metadata-only
最新バージョン United States Geological Survey により出版 3月 20, 2019 United States Geological Survey
ホーム:
http://usablight.org/
公開日:
2019年3月20日
ライセンス:
CC0 1.0

メタデータのみリソース のメタデータの最新版をEML または RTF としてダウンロード：

EML ファイルとしてのメタデータ ダウンロード English で (15 KB)
RTF ファイルとしてのメタデータ ダウンロード English で (14 KB)

説明

USAblight tracks occurrences of blight (Phytophthora infestans) in the United States of America on potato and tomato crops.

バージョン

次の表は、公にアクセス可能な公開バージョンのリソースのみ表示しています。

権利

研究者は権利に関する下記ステートメントを尊重する必要があります。:

パブリッシャーとライセンス保持者権利者は United States Geological Survey。 To the extent possible under law, the publisher has waived all rights to these data and has dedicated them to the Public Domain (CC0 1.0). Users may copy, modify, distribute and use the work, including for commercial purposes, without restriction.

GBIF登録

このリソースは GBIF に登録されていません。

キーワード

Metadata; oomycete; water mold; phytopathogenic fungi

連絡先

Annie Simpson
  • メタデータ提供者 ●
  • 最初のデータ採集者
  • Biologist
United States Geological Survey
  • 12201 Sunrise Valley Drive, Mail Stop 302
Reston
North Carolina
US
  • +1 (703) 648.4281
Dr. Jean Beagle Ristaino
  • 連絡先
  • Principle Investigator, USAblight.org
North Carolina State University
North Carolina
US
Amanda Seville
  • 連絡先
  • Technical Specialist, USAblight.org
North Carolina State University
North Carolina
US
Elizabeth Sellers
  • データ利用者

地理的範囲

Blight (Phytophthora infestans) occurrences in the United States of America.

座標（緯度経度） 南 西 [23.886, -168.75], 北 東 [71.636, -73.828]

生物分類学的範囲

Phytophthora infestans is a fungus-like microorganism, specifically an oomycete, which causes the serious potato and tomato disease known as late blight or potato blight.

Species Phythopthora infestans (late blight, potato blight, tomato blight)

書誌情報の引用

  1. Knaus, B. J.; Tabima, J. F.; Davis, C. E.; Judelson, H. S.; Grünwald, N. J. 2016. Genomic analyses of dominant US clonal lineages of Phytophthora infestans reveals a shared common ancestry for clonal lineages US11 and US18 and a lack of recently shared ancestry among all other US lineages. Phytopathology 106: 1393-1403. 10.1094/PHYTO-10-15-0279-R 10.1094/PHYTO-10-15-0279-R
  2. Hansen, Z.; Everts, K. L.; Fry, W. E.; Gevens, A. J.; Grünwald, N. J.; Gugino, B. K.; Johnson, D. A.; Johnson, S. B.; Judelson, H. S.; Knaus, B. J.; McGrath, M. T.; Myers, K. L.; Ristaino, J. B.; Roberts, P. D.; Secor, G. A.; Smart, C. D. 2016. Genetic variation within clonal lineages of Phytophthora infestans revealed through genotyping-by-sequencing, and implications for late blight epidemiology. PLOS One. DOI:10.1371/journal.pone.0165690 DOI:10.1371/journal.pone.0165690
  3. Fry, W.F. 2016. Phytophthora infestans: New tools (and old ones) lead to new understanding and precision management. Annual Review of Phytopathology 54: 529-547. https://doi.org/10.1146/annurev-phyto-080615-095951 https://doi.org/10.1146/annurev-phyto-080615-095951
  4. Hansen, Z.; Knaus, B.; Tabima, J.; Press, C.; Judelson, H.S.; Grunwald, N.; Smart, C. 2016. SNP-based differentiation of Phytophthora infestans clonal lineages using locked nucleic acid probes and high resolution melt analysis. Plant Disease 100: 1297-1306. https://doi.org/10.1094/PDIS-11-15-1247-RE https://doi.org/10.1094/PDIS-11-15-1247-RE
  5. Hansen, Z.; Knaus, B.; Tabima, J.; Press, C.; Judelson, H.; Grunwald, N.; Smart, C. 2016. Loop-Mediated Isothermal Amplification (LAMP) for Detection of the Tomato and Potato Late Blight Pathogen Phytophthora infestans. Journal of Applied Microbiology 120: 1010-1020. 10.1111/jam.13079 10.1111/jam.13079
  6. Frost, K.E.; Seidl Johnson, A.C.; Gevens, A.J. 2016. Survival of isolates of the US-22, US-23, and US-24 clonal lineages of Phytophthora infestans by asexual means in tomato seed at cold temperatures. Plant Disease 100: 180-187. https://doi.org/10.1094/PDIS-04-15-0462-RE https://doi.org/10.1094/PDIS-04-15-0462-RE
  7. Martin, M.D.; Vieira, F.G.; Ho, S.Y.W.; Wales, N.; Schubert, M.; Seguin-Orlando, A.; Ristaino, J.B.; Gilbert, M.T.P. 2015. Genomic characterization of a South Amerian Phytophthora hybrid mandates reassessment of the geographic origins of Phytophthora infestans. Molecular Biology and Evolution 33: 478-491. https://doi.org/10.1093/molbev/msv241 https://doi.org/10.1093/molbev/msv241
  8. Saville, A.; Graham, K.; Grünwald, N.J.; Myers, K.; Fry, W.E.; Ristaino, J.B. 2015. Fungicide sensitivity of US genotypes of Phytophthora infestans to six oomycete-targeted compounds. Plant Disease 99: 659-666. https://doi.org/10.1094/PDIS-05-14-0452-RE https://doi.org/10.1094/PDIS-05-14-0452-RE
  9. Childers, R.; Danies, G.; Myers, K.; Fei, Z.; Small, I.M.; Fry, W.E.. 2014. Acquired resistance to mefenoxam in sensitive isolates of Phytophthora infestans. Phytopathology 105: 342-349. http://dx.doi.org/10.1094/PHYTO-05-14-0148-R http://dx.doi.org/10.1094/PHYTO-05-14-0148-R
  10. Danies, G.; Myers, K.; Mideros, M F.; Restrepo, S.; Martin, F.; Cooke, DEL; Smart, C.D.; Ristaino, J. B.; Seaman, A.J.; Gugino, B. K.; Grunwald, N. J.; Fry, W. E. 2014. An ephemeral sexual population of Phytophthora infestans in the northeastern United States and Canada. PLOS One. DOI: 10.1371/journal.pone.0116354 DOI: 10.1371/journal.pone.0116354
  11. Lassiter, E.S.; Russ, C.; Nusbaum, C.; Zeng, Q.; Saville, A.; Olarte, R.A.; Carbone, I.; Hu, C.-H.; Seguin-Orlando, A.; Samaniego, J.A.; Thorne, J.L.; Ristaino, J.B. 2014. Mitochondrial genome sequences reveal evolutionary relationships of the Phytophthora 1c clade species. Current Genetics. 61(4):567-77. DOI: 10.1007/s00294-015-0480-3 DOI: 10.1007/s00294-015-0480-3
  12. Martin, M.D.; Ho, S.Y.W.; Wales, N.; Ristaino, J.B.; Gilbert, M.T.P. 2014. Persistence of the mitochondrial lineage responsible for the Irish potato famine in extant New World Phytophthora infestans. Molecular Biology and Evolution 31: 1414-1420. https://doi.org/10.1093/molbev/msu086 https://doi.org/10.1093/molbev/msu086
  13. Danies, G.; Small, I. M.; Myers, K.; Childers, R.; Fry, W. E. 2013. Phenotypic characterization of recent clonal lineages of Phytophthora infestans in the United States. Plant Disease 97: 873-881. http://dx.doi.org/10.1094/PDIS-07-12-0682-RE http://dx.doi.org/10.1094/PDIS-07-12-0682-RE
  14. Fry, W. E.; McGrath, M. T.; Seaman, A.; Zitter, T. A.; McLeod, A.; Danies, G.; Small, I. M.; Myers, K.; Everts, K.; Gevens, A. J.; Gugino, B. K.; Johnson, S. B.; Judelson, H.; Ristaino, J.; Roberts, P.; Secor, G.; Seebold, Jr., K.; Snover-Clift, K.; Wyenandt, A.; Grünwald, N. J.; Smart, C. D. 2013. The 2009 late blight epidemic in the eastern United States - Causes and results. Plant Disease 97 (3): 296-306. http://dx.doi.org/10.1094/PDIS-08-12-0791-FE http://dx.doi.org/10.1094/PDIS-08-12-0791-FE
  15. Lee, S.C; Ristaino, J. B.; Heitman, J. 2013. Parallels in intercellular communication in oomycete and fungal pathogens of plants and humans. Plos Pathogens 8(12): 1-4. https://doi.org/10.1371/journal.ppat.1003028 https://doi.org/10.1371/journal.ppat.1003028
  16. Martin, M.D.; Cappellini, E.; Samaniego, J.A.; Zepeda, M.L.; Campos, P.F.; Seguin-Orlando, A.; Wales, N.; Orlando, L.; Ho, S.Y.W.; Dietrich, F.S.; Mieczkowski, P.A.; Heitman, J.; Willerslev, E.; Krogh, A.; Ristaino, J.B.; Gilbert, M.T.P. 2013. Reconstructing genome evolution in historic samples of the Irish potato famine pathogen. Nature Communications. DOI: 10.1038/ncomms3172 DOI: 10.1038/ncomms3172
  17. Gevens, A. J.; Seidl, A. C. 2012. First report of late blight caused by Phytophthora infestans clonal lineage US-22 on tomato and potato (Solanum tuberosum) in Wisconsin. Plant Disease 97:423. https://doi.org/10.1094/PDIS-08-12-0807-PDN https://doi.org/10.1094/PDIS-08-12-0807-PDN
  18. Gevens, A. J; Seidl, A. C. 2012. First Report of Late Blight Caused by Phytophthora infestans Clonal Lineage US-24 on Potato (Solanum tuberosum) in Wisconsin. Plant Disease 97: 152. https://doi.org/10.1094/PDIS-09-12-0825-PDN https://doi.org/10.1094/PDIS-09-12-0825-PDN
  19. Gevens, A. J.; Seidl, A. C. 2012. First report of late blight caused by Phytophthora infestans clonal lineage US-23 on tomato (Solanum lycopersicum) and potato (Solanum tuberosum) in Wisconsin. Plant Disease 97: 839. https://doi.org/10.1094/PDIS-09-12-0821-PDN https://doi.org/10.1094/PDIS-09-12-0821-PDN
  20. Grünwald, N. J. 2012. Genome sequences of Phytophthora enable translational plant disease management. Canadian Journal of Plant Pathology 34: 13-19. https://doi.org/10.1080/07060661.2012.664568 https://doi.org/10.1080/07060661.2012.664568
  21. Hu, C. H.; Perez, F. G.; Donahoo, R.; McLeod, A.; Myers, K.; Ivors, K.; Secor, G.; Roberts, P. D.; Fry, W. E.; Deahl, K. L.; and Ristaino. J. B. 2012. Recent genotypes of Phytophthora infestans in eastern USA reveal clonal populations and reappearance of mefenoxam sensitivity. Plant Disease 96: 1323-1330. http://dx.doi.org/10.1094/PDIS-03-11-0156-RE http://dx.doi.org/10.1094/PDIS-03-11-0156-RE
  22. Ristaino, J. B. 2012. Worldwide migrations, host shifts and reemergence of Phytophthora infestans, the Plant Destroyer. Ch. 10 in: Evolution of Virulence in Eukaryotic Microbes (Eds. L. D. Sibley, B. Howlett, and J. Heitman, Wiley and Sons). http://www.usablight.org/sites/default/files/upload/file/Ristaino%20-%20Worldwide%20migrations%20host%20shifts%20and%20reemergence%20of%20Phytophthora%20infestans%20the%20plant%20destroyer.pdf DOI: 10.1002/9781118308165
  23. Sanchez Perez, A. Seidl, A. C., Gevens, A. J. 2012. Oospore potential of newly introduced genotypes of Phytophthora infestans. In: Abstracts of the Papers Presented at the 95th Annual Meeting of the Potato Association of America, Wilmington, North Carolina, USA August 14–18, 2011. American Journal of Potato Research 89: 30-52. https://doi.org/10.1007/s12230-011-9230-3 https://doi.org/10.1007/s12230-011-9230-3

追加のメタデータ